Name: Team ACTIVATE: Multi-genus Rotational Field Trial Description: This data schema refers to the Activity 2.3 phenotypic dataset which is taken on our large, multi-genus field trial. Classification: RDF401 Author: Lacey Sanderson Author Email: las166@mail.usask.ca ICT Group: Activate Schema package SAID: EIem5ascBmJ8ud_RcMLBGj1JprhWZkIg0ajaz92Q5q5x
Identifies the plot uniquely within a given location/year (i.e. siteyear).
UniqueID
Unique ID
Uniquely identifies the particular plot within the larger trial. It consists of the year the plot was grown, the Plot ID and either the Lentil OR Wheat ID depending on which is grown when these data are taken.
Lentil
Lentil
Uniquely identifies the Lentil germplasm planted in this plot within the trial.
Wheat
Wheat
Uniquely identifies the Wheat germplasm planted in this plot within the trial.
Combo
Combo
Identifies the Lentil-Wheat combination evaluated in this plot.
Rep
Rep
Replication number
Type
Type
Treatment or check
Col
Col
Column number
Row
Row
Row number
Block
Block
Block number
BlockRow
BlockRow
Row number within block
BlockCol
BlockCol
Column number within block
Name
Name
The full name of the Lentil or Wheat germplasm evaluated in this particular row.
Expt
Expt
Captures the particular siteyear and Lentil/Wheat portion of the experiment evaluated in this row. This also indicates where and then these data were collected.
Planting_Date
Planting Date (date)
The date the seeds were sown.
Emergence_Date
Emergence Date (date)
The date on which at least 50% of the seeds within the plot are visible above the soil.
Flowering_Date_R1
Flowering Date (R1; date)
The date at which there is one open flower at any node on 50% of the plants in the plot. This is R1 in the Lentil Reproductive & Maturity Staging Guide.
Maturity_Date_R7
Maturity Date (R7; date)
This is R7 in the Lentil Reproductive & Maturity Staging Guide.
Days_to_Emergence
Days to Emergence (date)
The number of days from the date of planting to the "Emergence Date".
One_Open_Flower_R1
Days till 10% of Plants have One Open Flower (R1; days)
The number of days from the date of planting to the "Flowering Date" where the Flowering date is the date the plants reach R1 according to the Lentil Reproductive & Maturity Staging Guide.
Half_Pods_Mature_R7
Days till 10% of Plants have 1/2 Pods Mature (R7; days)
The number of days from the date of planting to the "Maturity Date" where the Maturity date is the date the plants reach R7 according to the Lentil Reproductive & Maturity Staging Guide.
Lodging
Lodging (scale; 1=upright; 5=prostrate)
Indicates the rate of lodging in the plot between R6-R7 where lodging is defined as an irreversible falling over of the primary plant stem greater than 45 degrees.
yield_plot
yield plot (g)
The weight of the seed harvested from the plot by the combine.
yield_subsample
yield subsample (g)
Some plots have yield subsampled at R7 by hand. This value is recorded here.
yield_total
yield total (g)
For subsampled plots this is the yield from both the combine and the subsample. For others this will be equal to the plot yield measurement.
NIR_LenPro_preTweak
NIR_LenPro_preTweak
Protein percentage estimated by Near Infrared Spectroscopy (old calibration)
NIR
NIR
Protein percentage estimated by Near Infrared Spectroscopy (updated calibration)
Comment
Comment
General comments from the field crew that may be pertinent to know during analysis.
International schema information
Language
Name
Description
English
Team ACTIVATE: Multi-genus Rotational Field Trial
This data schema refers to the Activity 2.3 phenotypic dataset which is taken on our large, multi-genus field trial.
Selection lists
English
Expt entry codes
Entry code
Label
ACTIVATE 2024 Hunter Lentil
ACTIVATE 2024 Hunter Lentil
ACTIVATE 2024 Clavet Lentil
ACTIVATE 2024 Clavet Lentil
ACTIVATE 2025 Hunter Wheat
ACTIVATE 2025 Hunter Wheat
ACTIVATE 2025 Clavet Wheat
ACTIVATE 2025 Clavet Wheat
Lodging entry codes
Entry code
Label
1
Upright
5
Prostate
Type entry codes
Entry code
Label
Treatment
Treatment
Check
Check
Language-independent schema details
Attribute
Sensitive
Unit
Type
Character encoding
Required entry
plot
false
Text
true
UniqueID
false
Text
true
Lentil
false
Text
true
Wheat
false
Text
true
Combo
false
Text
true
Rep
false
Text
true
Type
false
Text
true
Col
false
Numeric
true
Row
false
Numeric
true
Block
false
Numeric
true
BlockRow
false
Numeric
true
BlockCol
false
Numeric
true
Name
false
Text
true
Expt
false
Text
true
Planting_Date
false
year-month-day
DateTime
false
Emergence_Date
false
year-month-day
DateTime
false
Flowering_Date_R1
false
year-month-day
DateTime
false
Maturity_Date_R7
false
year-month-day
DateTime
false
Days_to_Emergence
false
days
Numeric
false
One_Open_Flower_R1
false
days
Numeric
false
Half_Pods_Mature_R7
false
days
Numeric
false
Lodging
false
scale
Numeric
false
yield_plot
false
grams
Numeric
false
yield_subsample
false
grams
Numeric
false
yield_total
false
grams
Numeric
false
NIR_LenPro_preTweak
false
percent protein
Numeric
false
NIR
false
percent protein
Numeric
false
Comment
false
Text
false
Language-specific schema details
English
Attribute
Label
Description
List
plot
Plot
Identifies the plot uniquely within a given location/year (i.e. siteyear).
Not a list
UniqueID
Unique ID
Uniquely identifies the particular plot within the larger trial. It consists of the year the plot was grown, the Plot ID and either the Lentil OR Wheat ID depending on which is grown when these data are taken.
Not a list
Lentil
Lentil
Uniquely identifies the Lentil germplasm planted in this plot within the trial.
Not a list
Wheat
Wheat
Uniquely identifies the Wheat germplasm planted in this plot within the trial.
Not a list
Combo
Combo
Identifies the Lentil-Wheat combination evaluated in this plot.
Not a list
Rep
Rep
Replication number
Not a list
Type
Type
Treatment or check
Treatment, Check
Col
Col
Column number
Not a list
Row
Row
Row number
Not a list
Block
Block
Block number
Not a list
BlockRow
BlockRow
Row number within block
Not a list
BlockCol
BlockCol
Column number within block
Not a list
Name
Name
The full name of the Lentil or Wheat germplasm evaluated in this particular row.
Not a list
Expt
Expt
Captures the particular siteyear and Lentil/Wheat portion of the experiment evaluated in this row. This also indicates where and then these data were collected.
The date on which at least 50% of the seeds within the plot are visible above the soil.
Not a list
Flowering_Date_R1
Flowering Date (R1; date)
The date at which there is one open flower at any node on 50% of the plants in the plot. This is R1 in the Lentil Reproductive & Maturity Staging Guide.
Not a list
Maturity_Date_R7
Maturity Date (R7; date)
This is R7 in the Lentil Reproductive & Maturity Staging Guide.
Not a list
Days_to_Emergence
Days to Emergence (date)
The number of days from the date of planting to the "Emergence Date".
Not a list
One_Open_Flower_R1
Days till 10% of Plants have One Open Flower (R1; days)
The number of days from the date of planting to the "Flowering Date" where the Flowering date is the date the plants reach R1 according to the Lentil Reproductive & Maturity Staging Guide.
Not a list
Half_Pods_Mature_R7
Days till 10% of Plants have 1/2 Pods Mature (R7; days)
The number of days from the date of planting to the "Maturity Date" where the Maturity date is the date the plants reach R7 according to the Lentil Reproductive & Maturity Staging Guide.
Not a list
Lodging
Lodging (scale; 1=upright; 5=prostrate)
Indicates the rate of lodging in the plot between R6-R7 where lodging is defined as an irreversible falling over of the primary plant stem greater than 45 degrees.
Upright, Prostate
yield_plot
yield plot (g)
The weight of the seed harvested from the plot by the combine.
Not a list
yield_subsample
yield subsample (g)
Some plots have yield subsampled at R7 by hand. This value is recorded here.
Not a list
yield_total
yield total (g)
For subsampled plots this is the yield from both the combine and the subsample. For others this will be equal to the plot yield measurement.
Not a list
NIR_LenPro_preTweak
NIR_LenPro_preTweak
Protein percentage estimated by Near Infrared Spectroscopy (old calibration)
Not a list
NIR
NIR
Protein percentage estimated by Near Infrared Spectroscopy (updated calibration)
Not a list
Comment
Comment
General comments from the field crew that may be pertinent to know during analysis.